Contents:

1. Introduction to UNIX basic commands and UNIX Filters.




2. Perl programming and applications to Bioinformatics.
  • Basic scripting.
  • Regular expressions.
  • File i/o & control statement.
  • Subroutines & functions.
  • Writing scripts for automation.
3. Types of Biological Databases and Using it.
  • Genbank.
  • Protein Data Bank .
  • Uniprot.
4. Sequence Analysis Tools
  • Use of BLAST, FASTA (Nucleic Acids & Protiens).
  • Use of Clustal W.
  • Use of EMBOSS.
5. Phylogenetic Analysis
  • Use of Phyllip.
6. Molecular Modeling
  • Homology Modeling Swissmodeller.
  • Any Open Source Software.